Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
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Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
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External references
Supporting evidence
ID History
- Gene history

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DB built by WormBase

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Gene: Y40C5A.4 WBGene00021497

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Location

Chromosome IV: 7,349,283-7,365,111 reverse strand.

WBcel235:BX284604.4

About this gene

This gene has 8 transcripts (splice variants), 87 orthologues and 187 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
-	Y40C5A.4d.2	2344	293aa	Y40C5A.4d.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	W6RTL8	NP_001294192	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P1
-	Y40C5A.4a.1	2323	407aa	Y40C5A.4a.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9N3Y7	NP_741441
-	Y40C5A.4d.1	2290	293aa	Y40C5A.4d.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	W6RTL8	NP_001294192	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P1
-	Y40C5A.4b.1	2269	425aa	Y40C5A.4b.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8WTM2	NP_741440
-	Y40C5A.4a.2	2224	407aa	Y40C5A.4a.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9N3Y7	NP_741441
-	Y40C5A.4a.3	1628	407aa	Y40C5A.4a.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9N3Y7	NP_741441
-	Y40C5A.4b.2	1622	425aa	Y40C5A.4b.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8WTM2	NP_741440
-	Y40C5A.4c	2152	No protein	-	A non-coding gene.ncRNA	-	-

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Summary

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Gene-based displays