▼

Loading…

Favourite species

All species

Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree (Metazoa)
- Gene tree (Protostomes)
- Gene tree (Insects)
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

DB built by WormBase

.

Gene: cpsf-1 WBGene00022301

.

Description

CPSF_A domain-containing protein; putative cleavage and polyadenylation specificity factor subunit 1 [Source:NCBI gene;Acc:177003]

Location

Chromosome IV: 2,009,038-2,032,996 reverse strand.

WBcel235:BX284604.4

About this gene

This gene has 4 transcripts (splice variants), 85 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
-	Y76B12C.7a.1	4485	1454aa	Y76B12C.7a.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9N4C2	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
-	Y76B12C.7b.1	3792	1263aa	Y76B12C.7b.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	U4PCC4	-	-
-	Y76B12C.7c.1	1059	352aa	Y76B12C.7c.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	U4PMR4	-	-
-	Y76B12C.7d.1	336	111aa	Y76B12C.7d.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	U4PS25	-	-

.

Summary

.

.