Transcript: F48A11.1c.1

Description

Chitin synthase; Chitin synthase chs-2 [Source:NCBI gene;Acc:173405]

Location

Chromosome II: 196,985-211,649 forward strand.

About this transcript

This transcript has 19 exons and is annotated with 24 domains and features.

Gene

This transcript is a product of gene WBGene00000497 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
-	F48A11.1a.1	5523	1668aa	F48A11.1a.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	G5EBQ8	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
-	F48A11.1c.1	5103	1700aa	F48A11.1c.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0K3AR16	-	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
-	F48A11.1b.1	4821	1606aa	F48A11.1b.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	G5EBQ8	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 19, Coding exons: 19, Transcript length: 5,103 bps, Translation length: 1,700 residues

Version

F48A11.1c.1

Type

Protein coding

Annotation Method

Protein-coding model imported from WormBase

Transcript: F48A11.1c.1

Summary

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Transcript: F48A11.1c.1

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