Transcript: C12D5.8a.2

Description

NR LBD domain-containing protein [Source:NCBI gene;Acc:179149]

Location

About this transcript

This transcript has 5 exons and is annotated with 17 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
-	C12D5.8a.1	1557	338aa	C12D5.8a.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	G5ECI7	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
-	C12D5.8a.2	1462	338aa	C12D5.8a.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	G5ECI7	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
-	C12D5.8b.1	1171	133aa	C12D5.8b.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8I7M3	-	-
-	C12D5.8b.2	1035	133aa	C12D5.8b.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8I7M3	-	-

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 1,462 bps, Translation length: 338 residues

Version

C12D5.8a.2

Type

Protein coding

Annotation Method

Protein-coding model imported from WormBase