Homeobox protein pal-1 [Source:NCBI gene;Acc:175638]
Chromosome III: 4,804,688-4,808,094 reverse strand.
This transcript has 5 exons and is annotated with 11 domains and features.
This transcript is a product of gene WBGene00003912 Show transcript tableHide transcript table
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | UniProt | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|
| - | C38D4.6a.2 | 1451 | 270aa | C38D4.6a.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | P34766 | - | APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4, |
| - | C38D4.6b.1 | 1424 | 268aa | C38D4.6b.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | P34766 | - | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| - | C38D4.6b.2 | 1321 | 268aa | C38D4.6b.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | P34766 | - | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| - | C38D4.6a.1 | 1317 | 270aa | C38D4.6a.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | P34766 | - | APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4, |
| - | C38D4.6c.1 | 1192 | 222aa | C38D4.6c.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | P34766 | - | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
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