Transcript: F53G2.4b.1

Description

Prion-like-(Q/N-rich)-domain-bearing protein [Source:NCBI gene;Acc:173600]

Location

Chromosome II: 2,452,982-2,458,976 reverse strand.

About this transcript

This transcript has 10 exons and is annotated with 5 domains and features.

Gene

This transcript is a product of gene WBGene00004129 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
-	F53G2.4b.1	1694	536aa	F53G2.4b.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H2L066	-	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
-	F53G2.4a.1	1678	525aa	F53G2.4a.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A9D602	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
-	F53G2.4c.1	1166	157aa	F53G2.4c.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H2L065	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 10, Coding exons: 10, Transcript length: 1,694 bps, Translation length: 536 residues

Version

F53G2.4b.1

Type

Protein coding

Annotation Method

Protein-coding model imported from WormBase

Transcript: F53G2.4b.1

Summary

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Transcript: F53G2.4b.1

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