Transcript: T25D10.3b.1

Description

Saposin B-type domain-containing protein; Saposin-like protein 11 [Source:NCBI gene;Acc:174063]

Location

Chromosome II: 6,405,388-6,407,363 reverse strand.

About this transcript

This transcript has 8 exons and is annotated with 5 domains and features.

Gene

This transcript is a product of gene WBGene00004996 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
-	T25D10.3b.1	1228	384aa	T25D10.3b.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3B1E8S4	-	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
-	T25D10.3a.1	829	246aa	T25D10.3a.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q10018	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
-	T25D10.3c.1	525	174aa	T25D10.3c.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3B1DQA9	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 8, Coding exons: 8, Transcript length: 1,228 bps, Translation length: 384 residues

Version

T25D10.3b.1

Type

Protein coding

Annotation Method

Protein-coding model imported from WormBase

Transcript: T25D10.3b.1

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: T25D10.3b.1

Summary

About Us

Get help

Our sister sites

Follow us