Transcript: C06A12.3a.1

Description

DUF727 domain-containing protein [Source:NCBI gene;Acc:178529]

Location

Chromosome IV: 17,427,723-17,429,602 forward strand.

About this transcript

This transcript has 7 exons and is annotated with 6 domains and features.

Gene

This transcript is a product of gene WBGene00007357 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
-	C06A12.3a.1	885	253aa	C06A12.3a.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9XU41	-	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
-	C06A12.3b.1	462	153aa	C06A12.3b.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D3YT87	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
-	C06A12.3c.1	402	133aa	C06A12.3c.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D3YT88	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 885 bps, Translation length: 253 residues

Version

C06A12.3a.1

Type

Protein coding

Annotation Method

Protein-coding model imported from WormBase

Transcript: C06A12.3a.1

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Transcript: C06A12.3a.1

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