Transcript: F42G9.1a.1

Description

Protein phosphatase ppm-1.G [Source:NCBI gene;Acc:175233]

Location

About this transcript

This transcript has 5 exons and is annotated with 18 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
-	F42G9.1b.1	2005	469aa	F42G9.1b.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P49595	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
-	F42G9.1a.1	1954	491aa	F42G9.1a.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P49595	-	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 1,954 bps, Translation length: 491 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P49595

Version

F42G9.1a.1

Type

Protein coding

Annotation Method

Protein-coding model imported from WormBase