Transcript: Y38C1AA.3a.1

Description

Isochorismatase domain-containing protein [Source:NCBI gene;Acc:176833]

Location

Chromosome IV: 184,484-192,151 forward strand.

About this transcript

This transcript has 4 exons and is annotated with 7 domains and features.

Gene

This transcript is a product of gene WBGene00021395 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
-	Y38C1AA.3a.1	1246	335aa	Y38C1AA.3a.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9N426	-	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
-	Y38C1AA.3b.2	1191	315aa	Y38C1AA.3b.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A7WK39	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
-	Y38C1AA.3b.1	1012	315aa	Y38C1AA.3b.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A7WK39	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 1,246 bps, Translation length: 335 residues

Version

Y38C1AA.3a.1

Type

Protein coding

Annotation Method

Protein-coding model imported from WormBase

Transcript: Y38C1AA.3a.1

Summary

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Transcript: Y38C1AA.3a.1

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