Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

Configure this page

Transcript: Y48G8AL.5a.1

Description

SAM_MT_RSMB_NOP domain-containing protein; tRNA (cytosine(34)-C(5))-methyltransferase [Source:NCBI gene;Acc:171697]

Location

About this transcript

This transcript has 7 exons and is annotated with 17 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
-	Y48G8AL.5a.1	2466	684aa	Y48G8AL.5a.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9BL15	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
-	Y48G8AL.5b.1	1455	484aa	Y48G8AL.5b.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	V6CLP2	-	-
-	Y48G8AL.5c.1	1203	286aa	Y48G8AL.5c.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	V6CLJ9	-	-
-	Y48G8AL.5d.1	549	182aa	Y48G8AL.5d.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	V6CJ77	-	-

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 2,466 bps, Translation length: 684 residues

Version

Y48G8AL.5a.1

Type

Protein coding

Annotation Method

Protein-coding model imported from WormBase