
Culex quinquefasciatus (JHB) Assembly and Gene Annotation
About Culex quinquefasciatus
Culex quinquefasciatus, the Southern House Mosquito, is the vector responsible for transmission of filariasis and a number of viruses including West Nile virus, St. Louis encephalitis and Japanese encephalitis.
Picture credit (public domain): James Gathany (CDC) 2001
Assembly
The assembly presented is the VPISU_Cqui_1.0_pri_paternal assembly submitted to INSDC with the assembly accession GCA_015732765.1.
Annotation
Ensembl Metazoa displays the genes from NCBI Culex quinquefasciatus Annotation Release 100. Small RNA features, protein features and cross-references have been annotated by Ensembl Metazoa.
References
- Complete sequences of mitochondria genomes of Aedes aegypti and Culex quinquefasciatus and comparative analysis of mitochondrial DNA fragments inserted in the nuclear genomes. Behura, Susanta K et al. Insect biochemistry and molecular biology vol. 41,10 (2011): 770-7. doi:10.1016/j.ibmb.2011.05.006
Statistics
Summary
Assembly | VPISU_Cqui_1.0_pri_paternal, INSDC Assembly GCA_015732765.1, |
Database version | 109.1 |
Golden Path Length | 573,230,032 |
Genebuild by | NCBI |
Genebuild method | Import |
Data source | The Culex Quinquefasciatus Sequencing Consortium |
Gene counts
Coding genes | 15,094 |
Non coding genes | 2,766 |
Small non coding genes | 871 |
Long non coding genes | 1,895 |
Pseudogenes | 622 |
Gene transcripts | 28,522 |