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DB built by FlyBase

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Gene: MsrA FBgn0000565

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Description

Methionine sulfoxide reductase A

Gene Synonyms

Location

Primary_assembly 3L: 15,511,052-15,513,202 forward strand.

BDGP6.46:AE014296.5

About this gene

This gene has 6 transcripts (splice variants), 53 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
MsrA-RG	FBtr0330177	980	261aa	FBpp0303210	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PCL6	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MsrA-RC	FBtr0075552	1090	82aa	FBpp0075307	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7KUN2	-	-
MsrA-RF	FBtr0330176	1056	245aa	FBpp0303209	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PI66	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
MsrA-RA	FBtr0075553	980	246aa	FBpp0075308	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B5X0L2 P08761 Q6NLA4	-	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
MsrA-RB	FBtr0075554	968	242aa	FBpp0075309	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6AWF7	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
MsrA-RE	FBtr0303531	932	239aa	FBpp0292565	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F2FB74 Q7KUM8	-	-

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Summary

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