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DB built by FlyBase

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Gene: nkd FBgn0002945

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Description

naked cuticle

Gene Synonyms

Location

Primary_assembly 3L: 19,003,741-19,045,449 reverse strand.

BDGP6.46:AE014296.5

About this gene

This gene has 3 transcripts (splice variants), 35 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
nkd-RA	FBtr0075039	5051	928aa	FBpp0074806	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VVV9	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
nkd-RC	FBtr0332650	4685	806aa	FBpp0304896	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PFM6	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
nkd-RB	FBtr0332649	4674	553aa	FBpp0304895	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PCX7	-	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,

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Summary

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