Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree (Metazoa)
- Gene tree (Protostomes)
- Gene tree (Insects)
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Molecular function
- GO: Biological process
- GO: Cellular component
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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DB built by FlyBase

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Gene: px FBgn0003175

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Description

plexus

Gene Synonyms

Location

Primary_assembly 2R: 22,494,297-22,562,065 reverse strand.

BDGP6.46:AE013599.5

About this gene

This gene has 6 transcripts (splice variants) and 45 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
px-RA	FBtr0071838	6842	1995aa	FBpp0071749	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9W244	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
px-RE	FBtr0331942	8360	1916aa	FBpp0304275	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4KGB8	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
px-RG	FBtr0479816	8340	1959aa	FBpp0428149	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6M3QHJ5 Q9U8Q0	-	-
px-RF	FBtr0479815	8340	1926aa	FBpp0428148	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6M3Q8H4	-	-
px-RB	FBtr0112820	5214	1535aa	FBpp0111732	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A1A6S1 A8DYM2 A8DYM3 Q95TI5	-	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
px-RD	FBtr0331941	4365	944aa	FBpp0304274	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4KFF4 Q95TI5 Q9U8Q0	-	-

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Summary

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