Summary
- Splice variants
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DB built by FlyBase

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Gene: ey FBgn0005558

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Description

eyeless

Gene Synonyms

Location

Primary_assembly 4: 697,689-721,173 forward strand.

BDGP6.46:AE014135.4

About this gene

This gene has 4 transcripts (splice variants), 66 orthologues and 27 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
ey-RD	FBtr0100396	3462	898aa	FBpp0099810	Gene/transcipt that contains an open reading frame (ORF).Protein coding	O18381 O96791 Q59DQ2	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ey-RA	FBtr0089236	3282	838aa	FBpp0088300	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q4JH20	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ey-RC	FBtr0100395	2902	857aa	FBpp0099809	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1EBY5 Q59DQ1	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ey-RB	FBtr0089235	2854	624aa	FBpp0088299	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q53XF9	-	-

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Summary

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