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DB built by FlyBase

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Gene: tutl FBgn0010473

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Description

turtle

Gene Synonyms

Location

Primary_assembly 2L: 4,283,148-4,323,781 forward strand.

BDGP6.46:AE014134.6

About this gene

This gene has 10 transcripts (splice variants), 92 orthologues and 15 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
tutl-RJ	FBtr0347158	5263	1536aa	FBpp0312489	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0S0WJJ4	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
tutl-RI	FBtr0333485	7798	963aa	FBpp0305669	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1JHT0	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
tutl-RH	FBtr0333484	7436	1533aa	FBpp0305668	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PCI8	-	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
tutl-RK	FBtr0347159	5334	991aa	FBpp0312490	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0S0WIF3	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
tutl-RF	FBtr0301863	5250	963aa	FBpp0291077	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1JHT0	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
tutl-RD	FBtr0089270	5179	1508aa	FBpp0088327	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1JHS9	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
tutl-RG	FBtr0301864	5127	1508aa	FBpp0291078	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1JHS9 Q967D7	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
tutl-RC	FBtr0089269	4595	903aa	FBpp0088326	Gene/transcipt that contains an open reading frame (ORF).Protein coding	C0PTW0	-	-
tutl-RE	FBtr0089271	3388	902aa	FBpp0088328	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	-
tutl-RA	FBtr0089268	1874	377aa	FBpp0088325	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	-

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Summary

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