Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree (Metazoa)
- Gene tree (Protostomes)
- Gene tree (Insects)
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Biological process
- GO: Molecular function
- GO: Cellular component
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

DB built by FlyBase

.

Gene: nompA FBgn0016047

.

Description

no mechanoreceptor potential A

Gene Synonyms

Location

Primary_assembly 2R: 11,310,335-11,318,676 reverse strand.

BDGP6.46:AE013599.5

About this gene

This gene has 5 transcripts (splice variants), 48 orthologues and 6 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
nompA-RB	FBtr0089381	5235	1557aa	FBpp0088407	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A1Z8J4 Q9BMD5	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
nompA-RC	FBtr0089380	5173	1549aa	FBpp0088406	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A1Z8J3 Q1WWD1 Q32KF1 Q9BMD4	-	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
nompA-RA	FBtr0089379	5106	1557aa	FBpp0088405	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A1Z8J4	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
nompA-RD	FBtr0089382	5044	1549aa	FBpp0088953	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A1Z8J3	-	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
nompA-RF	FBtr0339483	4482	1306aa	FBpp0308565	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4LF37	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

.

Summary

.

.