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DB built by FlyBase

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Gene: l(2)k05819 FBgn0022153

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Description

lethal (2) k05819

Gene Synonyms

Location

Primary_assembly 2L: 4,394,196-4,400,487 forward strand.

BDGP6.46:AE014134.6

About this gene

This gene has 3 transcripts (splice variants) and 84 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
l(2)k05819-RA	FBtr0077432	4864	1449aa	FBpp0077122	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D4G7D1 Q961P5 Q9VQZ1	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
l(2)k05819-RD	FBtr0331447	5201	1434aa	FBpp0303864	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7KU45	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
l(2)k05819-RC	FBtr0305968	4819	1434aa	FBpp0297110	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E8NHA9 Q7KU45	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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