Summary
- Splice variants
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Pan-taxonomic Compara
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DB built by FlyBase

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Gene: aru FBgn0029095

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Description

arouser

Gene Synonyms

Location

Primary_assembly 2L: 861,849-868,354 reverse strand.

BDGP6.46:AE014134.6

About this gene

This gene has 3 transcripts (splice variants), 82 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
aru-RA	FBtr0078033	2922	805aa	FBpp0077697	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D3DMF7 Q8IPW1	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
aru-RD	FBtr0078031	3026	778aa	FBpp0077695	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VPU7	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
aru-RC	FBtr0078032	2903	778aa	FBpp0077696	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8T8Q9 Q9U3Z9 Q9VPU7	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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