Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree (Metazoa)
- Gene tree (Protostomes)
- Gene tree (Insects)
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
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Molecular interactions
Regulation
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ID History
- Gene history

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DB built by FlyBase

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Gene: CG3168 FBgn0029896

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Location

Primary_assembly X: 6,720,004-6,739,986 reverse strand.

BDGP6.46:AE014298.5

About this gene

This gene has 7 transcripts (splice variants), 57 orthologues and 39 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CG3168-RD	FBtr0340265	3808	632aa	FBpp0309231	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9W3W9	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
CG3168-RG	FBtr0340268	3762	632aa	FBpp0309234	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9W3W9	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
CG3168-RF	FBtr0340267	3743	632aa	FBpp0309233	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9W3W9	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
CG3168-RC	FBtr0070984	3610	632aa	FBpp0070944	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9W3W9	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
CG3168-RE	FBtr0340266	3375	632aa	FBpp0309232	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9W3W9	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
CG3168-RA	FBtr0070985	3291	632aa	FBpp0070945	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9W3W9	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
CG3168-RB	FBtr0070986	3243	632aa	FBpp0070946	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9W3W9	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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