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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree (Metazoa)
- Gene tree (Protostomes)
- Gene tree (Insects)
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
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- Structural variants
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DB built by FlyBase

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Gene: Rab39 FBgn0029959

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Description

Rab39

Gene Synonyms

Location

Primary_assembly X: 7,734,923-7,736,756 forward strand.

BDGP6.46:AE014298.5

About this gene

This gene has 2 transcripts (splice variants), 77 orthologues and 33 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
Rab39-RB	FBtr0307272	1406	218aa	FBpp0298273	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6J915 Q8SYS5 Q9W3Q0	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
Rab39-RA	FBtr0071072	1129	218aa	FBpp0071030	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9W3Q0	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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