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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
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- Gene gain/loss tree
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Pan-taxonomic Compara
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DB built by FlyBase

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Gene: prtp FBgn0030329

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Description

pretaporter

Gene Synonyms

Location

Primary_assembly X: 11,716,756-11,719,894 forward strand.

BDGP6.46:AE014298.5

About this gene

This gene has 4 transcripts (splice variants), 72 orthologues and 9 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
prtp-RA	FBtr0073551	1763	416aa	FBpp0073396	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VYV3	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
prtp-RD	FBtr0332954	1964	353aa	FBpp0305170	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PGX2	-	-
prtp-RB	FBtr0303334	1746	416aa	FBpp0292397	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VYV3	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
prtp-RC	FBtr0303335	1740	416aa	FBpp0292398	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VYV3	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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