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DB built by FlyBase

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Gene: Karl FBgn0030334

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Description

Karl

Gene Synonyms

Location

Primary_assembly X: 11,787,381-11,792,253 forward strand.

BDGP6.46:AE014298.5

About this gene

This gene has 4 transcripts (splice variants), 72 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
Karl-RC	FBtr0346276	2447	266aa	FBpp0312033	Gene/transcipt that contains an open reading frame (ORF).Protein coding	C4IY11 Q95R53 Q962B6 Q9VYU5	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
Karl-RD	FBtr0346277	1774	266aa	FBpp0312034	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VYU5	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
Karl-RB	FBtr0073557	1418	266aa	FBpp0073402	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VYU5	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
Karl-RA	FBtr0073556	1075	266aa	FBpp0073401	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VYU5	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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