Summary
- Splice variants
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Sequence
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Pan-taxonomic Compara
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DB built by FlyBase

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Gene: Rbp1-like FBgn0030479

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Description

Rbp1-like

Gene Synonyms

Location

Primary_assembly X: 13,380,166-13,384,877 reverse strand.

BDGP6.46:AE014298.5

About this gene

This gene has 3 transcripts (splice variants), 59 orthologues and 4 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
Rbp1-like-RB	FBtr0304001	2452	247aa	FBpp0292970	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9MS48	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
Rbp1-like-RC	FBtr0339838	1456	158aa	FBpp0308870	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q7YR34 Q9VYD8	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Rbp1-like-RA	FBtr0073790	917	158aa	FBpp0073621	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VYD8	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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