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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree (Metazoa)
- Gene tree (Protostomes)
- Gene tree (Insects)
- Gene gain/loss tree
- Orthologues
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Pan-taxonomic Compara
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- Variant table
- Variant image
- Structural variants
Gene expression
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DB built by FlyBase

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Gene: CG5541 FBgn0030603

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Gene Synonyms

Location

Primary_assembly X: 15,044,123-15,051,842 forward strand.

BDGP6.46:AE014298.5

About this gene

This gene has 2 transcripts (splice variants) and 9 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CG5541-RA	FBtr0073958	2514	463aa	FBpp0073775	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E3CTR3 Q9VXZ2	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
CG5541-RB	FBtr0073959	2304	463aa	FBpp0073776	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VXZ2	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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