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DB built by FlyBase

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Gene: Ssu72 FBgn0031054

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Description

Ssu72 CTD phosphatase

Gene Synonyms

Location

Primary_assembly X: 19,664,561-19,666,866 forward strand.

BDGP6.46:AE014298.5

About this gene

This gene has 3 transcripts (splice variants) and 72 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
Ssu72-RA	FBtr0074747	2186	195aa	FBpp0074516	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VWE4	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
Ssu72-RB	FBtr0332889	2183	194aa	FBpp0305110	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PHZ3	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
Ssu72-RC	FBtr0344152	1368	195aa	FBpp0310565	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VWE4	-	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,

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Summary

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