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Summary
- Splice variants
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DB built by FlyBase

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Gene: Nup205 FBgn0031078

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Description

Nucleoporin 205kD

Gene Synonyms

Location

Primary_assembly X: 19,852,214-19,859,379 forward strand.

BDGP6.46:AE014298.5

About this gene

This gene has 2 transcripts (splice variants) and 81 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
Nup205-RB	FBtr0074798	6470	2090aa	FBpp0074567	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A9YI09 A9YI11 A9YI14 Q8IQV9	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
Nup205-RA	FBtr0074799	6401	2067aa	FBpp0074568	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A9YI10 Q9VWB8	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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