Summary
- Splice variants
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Sequence
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Literature
Metazoan Compara
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- Gene tree (Metazoa)
- Gene tree (Protostomes)
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- Orthologues
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Pan-taxonomic Compara
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Genetic Variation
- Variant table
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DB built by FlyBase

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Gene: CG10283 FBgn0032681

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Location

Primary_assembly 2L: 18,472,964-18,484,513 reverse strand.

BDGP6.46:AE014134.6

About this gene

This gene has 4 transcripts (splice variants) and 17 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CG10283-RC	FBtr0300675	3040	746aa	FBpp0289899	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1JHK9	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
CG10283-RD	FBtr0300676	2983	746aa	FBpp0289900	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1JHK9 Q5BHX9	-	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
CG10283-RA	FBtr0081085	2917	730aa	FBpp0080635	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VJ84	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
CG10283-RB	FBtr0081086	2860	730aa	FBpp0080636	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9WDW9 Q95RA6 Q9VJ84	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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