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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree (Metazoa)
- Gene tree (Protostomes)
- Gene tree (Insects)
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
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- Orthologues
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- GO: Cellular component
- GO: Biological process
- GO: Molecular function
Phenotypes
Genetic Variation
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DB built by FlyBase

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Gene: Tsp42Ei FBgn0033130

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Description

Tetraspanin 42Ei

Gene Synonyms

Location

Primary_assembly 2R: 7,035,125-7,036,949 forward strand.

BDGP6.46:AE013599.5

About this gene

This gene has 2 transcripts (splice variants), 104 orthologues and 32 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
Tsp42Ei-RA	FBtr0089028	1304	229aa	FBpp0088099	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7JZW3	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
Tsp42Ei-RB	FBtr0336872	1140	229aa	FBpp0307821	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7JZW3 Q9NB12	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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