Summary
- Splice variants
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DB built by FlyBase

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Gene: CG18004 FBgn0033566

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Gene Synonyms

Location

Primary_assembly 2R: 10,885,019-10,886,375 forward strand.

BDGP6.32:AE013599.5

About this gene

This gene has 3 transcripts (splice variants) and 125 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CG18004-RA	FBtr0089728	1044	297aa	FBpp0088669	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A1Z8D5 C6SV52	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
CG18004-RB	FBtr0089729	1168	291aa	FBpp0088670	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A1Z8D4 Q8MKK6	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
CG18004-RD	FBtr0339473	1026	291aa	FBpp0308556	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A1Z8D6	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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