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DB built by FlyBase

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Gene: Cpr49Ac FBgn0033725

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Description

Cuticular protein 49Ac

Gene Synonyms

Location

Primary_assembly 2R: 12,386,666-12,390,057 forward strand.

BDGP6.46:AE013599.5

About this gene

This gene has 6 transcripts (splice variants), 17 orthologues and 37 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
Cpr49Ac-RC	FBtr0087916	1434	324aa	FBpp0087027	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7JR69	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
Cpr49Ac-RD	FBtr0301372	1733	123aa	FBpp0290586	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1JH44	-	-
Cpr49Ac-RG	FBtr0345948	1701	315aa	FBpp0311862	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4LG85	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
Cpr49Ac-RF	FBtr0339631	1407	315aa	FBpp0308694	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4LG85	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
Cpr49Ac-RA	FBtr0087917	1344	294aa	FBpp0087028	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q960H8	-	-
Cpr49Ac-RE	FBtr0339630	1317	285aa	FBpp0308693	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4LF74	-	-

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Summary

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