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DB built by FlyBase

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Gene: CG9815 FBgn0034861

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Gene Synonyms

Location

Primary_assembly 2R: 23,421,521-23,433,354 reverse strand.

BDGP6.46:AE013599.5

About this gene

This gene has 4 transcripts (splice variants) and 10 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CG9815-RB	FBtr0113111	979	232aa	FBpp0112024	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A8DYN5	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
CG9815-RC	FBtr0343263	1108	223aa	FBpp0309928	Gene/transcipt that contains an open reading frame (ORF).Protein coding	C0HDP5	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
CG9815-RD	FBtr0343264	928	208aa	FBpp0309929	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4LGF4	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
CG9815-RA	FBtr0072024	920	219aa	FBpp0071933	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9W1Q2	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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