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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree (Metazoa)
- Gene tree (Protostomes)
- Gene tree (Insects)
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
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- Orthologues
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- GO: Biological process
- GO: Molecular function
- GO: Cellular component
Phenotypes
Genetic Variation
- Variant table
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- Structural variants
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DB built by FlyBase

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Gene: CG13887 FBgn0035165

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Gene Synonyms

Location

Primary_assembly 3L: 837,861-839,931 forward strand.

BDGP6.46:AE014296.5

About this gene

This gene has 4 transcripts (splice variants) and 77 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CG13887-RE	FBtr0345588	1446	228aa	FBpp0311657	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9W0M4	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
CG13887-RD	FBtr0304797	1306	184aa	FBpp0293337	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B8A3Z7 B9EQV3	-	-
CG13887-RB	FBtr0072584	1262	228aa	FBpp0072481	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9W0M4	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
CG13887-RC	FBtr0072583	1159	228aa	FBpp0072480	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9W0M4	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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