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DB built by FlyBase

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Gene: CNMa FBgn0035282

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Description

CNMamide

Gene Synonyms

Location

Primary_assembly 3L: 1,850,915-1,855,591 reverse strand.

BDGP6.46:AE014296.5

About this gene

This gene has 3 transcripts (splice variants) and 1 orthologue.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CNMa-RC	FBtr0303155	1900	193aa	FBpp0292254	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9W076	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
CNMa-RD	FBtr0332672	1606	189aa	FBpp0304918	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PE91 Q4V5Y1	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
CNMa-RB	FBtr0300713	1261	193aa	FBpp0289937	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9W076	-	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,

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Summary

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