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DB built by FlyBase

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Gene: Pura FBgn0035802

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Description

Puratrophin-1-like

Gene Synonyms

Location

Primary_assembly 3L: 7,593,091-7,639,573 forward strand.

BDGP6.46:AE014296.5

About this gene

This gene has 4 transcripts (splice variants), 62 orthologues and 9 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
Pura-RA	FBtr0089850	6438	1904aa	FBpp0088791	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7KU89	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Pura-RD	FBtr0334064	6257	1898aa	FBpp0306189	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PEF7	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Pura-RB	FBtr0089849	5584	1428aa	FBpp0088790	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q29R11 Q7KU88 Q86NW6 Q8MSF1	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Pura-RC	FBtr0089851	3253	872aa	FBpp0088792	Gene/transcipt that contains an open reading frame (ORF).Protein coding	C7LAH7 Q7KU87	-	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,

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Summary

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