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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree (Metazoa)
- Gene tree (Protostomes)
- Gene tree (Insects)
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
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Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
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Molecular interactions
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- Gene history

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DB built by FlyBase

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Gene: CG10616 FBgn0036286

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Location

Primary_assembly 3L: 12,471,728-12,474,428 forward strand.

BDGP6.46:AE014296.5

About this gene

This gene has 3 transcripts (splice variants) and 13 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CG10616-RB	FBtr0308896	1737	508aa	FBpp0301023	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9NE87	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
CG10616-RC	FBtr0346569	1838	492aa	FBpp0312167	Gene/transcipt that contains an open reading frame (ORF).Protein coding	C8VV60 Q9VTX8	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
CG10616-RA	FBtr0075956	1689	492aa	FBpp0075688	Gene/transcipt that contains an open reading frame (ORF).Protein coding	C8VV60 Q86D35 Q9VTX8	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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