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DB built by FlyBase

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Gene: eRF1 FBgn0036974

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Description

eukaryotic translation release factor 1

Gene Synonyms

Location

Primary_assembly 3L: 20,348,355-20,353,873 forward strand.

BDGP6.46:AE014296.5

About this gene

This gene has 8 transcripts (splice variants) and 77 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
eRF1-RI	FBtr0331818	1873	447aa	FBpp0304202	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PFR9	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
eRF1-RA	FBtr0078177	2321	438aa	FBpp0077835	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D1Z373 Q9VPH7	-	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
eRF1-RE	FBtr0078175	2030	438aa	FBpp0077833	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D1Z373 Q9VPH7	-	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
eRF1-RH	FBtr0331817	1806	437aa	FBpp0304201	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PD27	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
eRF1-RB	FBtr0078174	1801	438aa	FBpp0077832	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D1Z373 Q9VPH7	-	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
eRF1-RF	FBtr0078176	1788	438aa	FBpp0077834	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D1Z373 Q9VPH7	-	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
eRF1-RC	FBtr0078173	1765	438aa	FBpp0077831	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D1Z373 Q9VPH7	-	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
eRF1-RG	FBtr0078178	1739	438aa	FBpp0077836	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D1Z373 Q9VPH7	-	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,

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Summary

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