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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree (Metazoa)
- Gene tree (Protostomes)
- Gene tree (Insects)
- Gene gain/loss tree
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Pan-taxonomic Compara
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DB built by FlyBase

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Gene: BNIP3 FBgn0037007

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Gene Synonyms

Location

Primary_assembly 3L: 20,514,598-20,519,393 reverse strand.

BDGP6.46:AE014296.5

About this gene

This gene has 5 transcripts (splice variants) and 53 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
BNIP3-RA	FBtr0078216	1725	201aa	FBpp0077874	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VPD6	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
BNIP3-RC	FBtr0078217	1905	177aa	FBpp0077875	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8IPU7	-	-
BNIP3-RE	FBtr0331567	1543	177aa	FBpp0303957	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8IPU7	-	-
BNIP3-RD	FBtr0078219	1477	177aa	FBpp0077877	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8IPU7	-	-
BNIP3-RB	FBtr0078218	1344	193aa	FBpp0077876	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D3DN08 Q8IPU8	-	-

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Summary

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