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DB built by FlyBase

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Gene: ArfGAP3 FBgn0037182

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Description

ADP-ribosylation factor GTPase activating protein 3

Gene Synonyms

Location

Primary_assembly 3L: 22,714,313-22,717,577 reverse strand.

BDGP6.46:AE014296.5

About this gene

This gene has 7 transcripts (splice variants), 286 orthologues and 7 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
ArfGAP3-RH	FBtr0331775	2296	553aa	FBpp0304160	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A8JNX0	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ArfGAP3-RA	FBtr0078539	2689	552aa	FBpp0078191	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VNS2	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ArfGAP3-RC	FBtr0113186	2580	552aa	FBpp0112099	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VNS2	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ArfGAP3-RB	FBtr0078540	2307	552aa	FBpp0078192	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VNS2	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ArfGAP3-RG	FBtr0330175	2298	549aa	FBpp0303208	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PIL3	-	-
ArfGAP3-RF	FBtr0330174	2193	514aa	FBpp0303207	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PG88	-	-
ArfGAP3-RE	FBtr0330173	2190	513aa	FBpp0303206	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PGG0	-	-

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Summary

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