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DB built by FlyBase

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Gene: p53 FBgn0039044

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Description

p53

Gene Synonyms

Location

Primary_assembly 3R: 23,049,657-23,054,082 reverse strand.

BDGP6.46:AE014297.3

About this gene

This gene has 4 transcripts (splice variants) and 90 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
p53-RB	FBtr0084360	1870	495aa	FBpp0083753	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D5AEJ5 Q2XVY6 Q2XVY7 Q8IH92 Q8IMZ4	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
p53-RC	FBtr0301765	2095	385aa	FBpp0290979	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9N6D8	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
p53-RA	FBtr0084359	1577	385aa	FBpp0083752	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9N6D8	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
p53-RE	FBtr0345262	1324	334aa	FBpp0311439	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4K7P1	-	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,

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Summary

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