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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree (Metazoa)
- Gene tree (Protostomes)
- Gene tree (Insects)
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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DB built by FlyBase

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Gene: CG1647 FBgn0039602

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Location

Primary_assembly 3R: 28,820,221-28,824,508 forward strand.

BDGP6.46:AE014297.3

About this gene

This gene has 2 transcripts (splice variants) and 14 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CG1647-RA	FBtr0085326	4103	1222aa	FBpp0084695	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A9UNA9 B3DMQ2 B7FNP1 Q9VAT1	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
CG1647-RB	FBtr0336764	4091	1218aa	FBpp0307740	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4KH87	-	-

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Summary

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