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DB built by FlyBase

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Gene: Ctl2 FBgn0039637

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Description

Choline transporter-like 2

Gene Synonyms

Location

Primary_assembly 3R: 29,123,370-29,128,247 forward strand.

BDGP6.46:AE014297.3

About this gene

This gene has 3 transcripts (splice variants), 130 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
Ctl2-RB	FBtr0085372	3463	796aa	FBpp0084741	Gene/transcipt that contains an open reading frame (ORF).Protein coding	C4XVJ5 Q9VAP3	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
Ctl2-RA	FBtr0085371	3195	796aa	FBpp0084740	Gene/transcipt that contains an open reading frame (ORF).Protein coding	C4XVJ5 Q8MR01 Q9VAP3	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
Ctl2-RC	FBtr0085373	3162	796aa	FBpp0084742	Gene/transcipt that contains an open reading frame (ORF).Protein coding	C4XVJ5 Q9VAP3	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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