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DB built by FlyBase

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Gene: l(1)G0469 FBgn0040153

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Description

lethal (1) G0469

Gene Synonyms

Location

Primary_assembly X: 14,203,961-14,211,457 reverse strand.

BDGP6.46:AE014298.5

About this gene

This gene has 3 transcripts (splice variants) and 3 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
l(1)G0469-RC	FBtr0333428	2729	338aa	FBpp0305619	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A8JUW4	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
l(1)G0469-RD	FBtr0333429	3709	321aa	FBpp0305620	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VY52	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
l(1)G0469-RA	FBtr0073927	1761	321aa	FBpp0073744	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VY52	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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