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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree (Metazoa)
- Gene tree (Protostomes)
- Gene tree (Insects)
- Gene gain/loss tree
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Pan-taxonomic Compara
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DB built by FlyBase

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Gene: CG31524 FBgn0051524

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Gene Synonyms

Location

Primary_assembly 3R: 30,512,325-30,514,355 reverse strand.

BDGP6.46:AE014297.3

About this gene

This gene has 2 transcripts (splice variants), 46 orthologues and 25 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CG31524-RA	FBtr0085684	1691	536aa	FBpp0085046	Gene/transcipt that contains an open reading frame (ORF).Protein coding	C9QPA9 Q4V6T9 Q8IMI2	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
CG31524-RB	FBtr0110860	1688	535aa	FBpp0110159	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q0KHY6 Q4V5K4	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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