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DB built by FlyBase

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Gene: AMPdeam FBgn0052626

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Description

AMP deaminase

Gene Synonyms

Location

Primary_assembly X: 13,830,741-13,845,866 reverse strand.

BDGP6.46:AE014298.5

About this gene

This gene has 9 transcripts (splice variants) and 80 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
AMPdeam-RK	FBtr0340444	2810	798aa	FBpp0309386	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D6W4U3 X2JEY5	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
AMPdeam-RI	FBtr0309245	4679	258aa	FBpp0301184	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9NDW2	-	-
AMPdeam-RC	FBtr0073833	3216	707aa	FBpp0073664	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q961Q7	-	-
AMPdeam-RE	FBtr0301044	2879	771aa	FBpp0290266	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6NP70 Q9VY76	-	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
AMPdeam-RF	FBtr0301045	2814	649aa	FBpp0290267	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q76NQ9	-	-
AMPdeam-RH	FBtr0303292	2656	789aa	FBpp0292384	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9MS55	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
AMPdeam-RL	FBtr0340445	2647	786aa	FBpp0309387	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X2JFA0	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
AMPdeam-RJ	FBtr0309246	2620	777aa	FBpp0301185	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D0IQK3	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
AMPdeam-RG	FBtr0301046	2611	774aa	FBpp0290268	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q76NR0	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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