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DB built by FlyBase

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Gene: Snoo FBgn0085450

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Description

Sno oncogene

Gene Synonyms

Location

Primary_assembly 2L: 7,891,187-7,984,196 reverse strand.

BDGP6.46:AE014134.6

About this gene

This gene has 4 transcripts (splice variants) and 1 orthologue.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
Snoo-RG	FBtr0343409	7205	1223aa	FBpp0310055	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q00G30	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
Snoo-RC	FBtr0112718	7131	1223aa	FBpp0111630	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q00G30	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
Snoo-RD	FBtr0112719	6336	1223aa	FBpp0111631	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q00G30	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
Snoo-RB	FBtr0112717	5201	1223aa	FBpp0111629	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0PDV0 A0PDV1 A0PDV2 B4YXD1 B4YXD3 B4YXD4 B4YXD8 B4YXE0 B4YXE5 G4LU73 Q00G30 Q00G33 Q00G34 Q2XY50 Q961E6	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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