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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree (Metazoa)
- Gene tree (Protostomes)
- Gene tree (Insects)
- Gene gain/loss tree
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Pan-taxonomic Compara
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- Structural variants
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DB built by FlyBase

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Gene: CG42486 FBgn0259989

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Gene Synonyms

Location

Primary_assembly 2L: 11,843,137-11,844,063 forward strand.

BDGP6.46:AE014134.6

About this gene

This gene has 2 transcripts (splice variants), 10 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CG42486-RA	FBtr0300437	876	77aa	FBpp0289666	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1JHG3	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
CG42486-RB	FBtr0346518	380	77aa	FBpp0312136	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1JHG3	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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