Summary
- Splice variants
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Sequence
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Literature
Metazoan Compara
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- Orthologues
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Pan-taxonomic Compara
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DB built by FlyBase

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Gene: par-1 FBgn0260934

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Description

par-1

Gene Synonyms

Location

Primary_assembly 2R: 19,456,170-19,485,686 forward strand.

BDGP6.46:AE013599.5

About this gene

This gene has 11 transcripts (splice variants), 70 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
par-1-RX	FBtr0330245	4827	1170aa	FBpp0303278	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A1ZBL9 Q95T80	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
par-1-RV	FBtr0330244	6079	951aa	FBpp0303277	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A1ZBL5	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
par-1-RT	FBtr0301506	4990	1058aa	FBpp0290721	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q963E5	-	-
par-1-RH	FBtr0086457	4868	993aa	FBpp0085653	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A1ZBL7	-	-
par-1-RL	FBtr0100390	4858	833aa	FBpp0099804	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6NPA6	-	-
par-1-RP	FBtr0301503	4849	1141aa	FBpp0290718	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1JGN0 Q95U75 Q9V8V7	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
par-1-RS	FBtr0301505	4840	827aa	FBpp0290720	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1JGM9 Q6SAI5 Q8IGD5	-	-
par-1-RA	FBtr0086450	4827	938aa	FBpp0085646	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9V8V8	-	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
par-1-RR	FBtr0301504	3918	1046aa	FBpp0290719	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7YU80	-	-
par-1-RW	FBtr0330243	3863	832aa	FBpp0303276	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q963E6	-	-
par-1-RQ	FBtr0100393	3321	357aa	FBpp0099807	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7K9Q9 Q8MQR8	-	-

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Summary

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