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Summary
- Splice variants
- Transcript comparison
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Sequence
- Secondary Structure
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Literature
Metazoan Compara
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Pan-taxonomic Compara
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DB built by FlyBase

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Gene: LSm7 FBgn0261068

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Description

Like Sm 7

Gene Synonyms

Location

Primary_assembly 2L: 16,742,315-16,743,100 reverse strand.

BDGP6.46:AE014134.6

About this gene

This gene has 3 transcripts (splice variants), 67 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
LSm7-RA	FBtr0080934	705	110aa	FBpp0080488	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VJI7	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
LSm7-RC	FBtr0343770	544	110aa	FBpp0310328	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B1PFP9 B1PFQ8 B1PFR1 B1PFR5 B1PFS0 B1PFS2 Q1EC09 Q9VJI7	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
LSm7-RB	FBtr0308804	466	110aa	FBpp0300961	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VJI7	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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